edward boyden lab Search Results


aav1 cag tdtomato edward boyden lab addgene  (Addgene inc)
93
Addgene inc aav1 cag tdtomato edward boyden lab addgene
Aav1 Cag Tdtomato Edward Boyden Lab Addgene, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/aav1 cag tdtomato edward boyden lab addgene/product/Addgene inc
Average 93 stars, based on 1 article reviews
aav1 cag tdtomato edward boyden lab addgene - by Bioz Stars, 2026-05
93/100 stars
  Buy from Supplier
edward boyden lab plasmid paav syn somarchon  (Addgene inc)
93
Addgene inc edward boyden lab plasmid paav syn somarchon
a Two-dimensional tSNE of the pre-logit hidden layer of deteRNNt for the validation set. Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward <t>Boyden</t> Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ). The second-most likely lab predicted by deteRNNt on this plasmid is shown in red, with plasmid schematic above. d Predicting lab-of-origin from subsequences of varying lengths K scanned across the linear sequence. At each x , the probabilities are given by softmax of the mean of logits from subsequences which include that position in the window. Color indicates subsequence K -mer length. Linear sequence position is given by the x axis and shared with ( b ) with the plasmid schematic above. e Custom-designed gene-drive plasmid derived from an Omar Akbari Aedes aegypti germline-Cas9 gene-drive backbone (AAEL010097-Cas9, Addgene # 100707 ) carrying a payload of Cas9-dsRed, a guide cassette, and SomArchon from the Boyden plasmid pAAV-Syn-SomArchon from ( c ), with scanning subsequence window as in ( d ) and K = 1024. Predicted probabilities for Omar Akbari (red) and Boyden (blue) are shown, along with the correspondingly colored plasmid schematic. All unlabeled regions are from the Akbari vector. The right and left homology arms shown in gray were introduced by our design and come from neither lab’s material, and the U6a and U6c were from Akbari lab material (Addgene # 117221 and # 117223 , respectively) but introduced into the backbone by our design (gray outlined in red).
Edward Boyden Lab Plasmid Paav Syn Somarchon, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/edward boyden lab plasmid paav syn somarchon/product/Addgene inc
Average 93 stars, based on 1 article reviews
edward boyden lab plasmid paav syn somarchon - by Bioz Stars, 2026-05
93/100 stars
  Buy from Supplier
edward boyden lab  (Addgene inc)
96
Addgene inc edward boyden lab
a Two-dimensional tSNE of the pre-logit hidden layer of deteRNNt for the validation set. Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward <t>Boyden</t> Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ). The second-most likely lab predicted by deteRNNt on this plasmid is shown in red, with plasmid schematic above. d Predicting lab-of-origin from subsequences of varying lengths K scanned across the linear sequence. At each x , the probabilities are given by softmax of the mean of logits from subsequences which include that position in the window. Color indicates subsequence K -mer length. Linear sequence position is given by the x axis and shared with ( b ) with the plasmid schematic above. e Custom-designed gene-drive plasmid derived from an Omar Akbari Aedes aegypti germline-Cas9 gene-drive backbone (AAEL010097-Cas9, Addgene # 100707 ) carrying a payload of Cas9-dsRed, a guide cassette, and SomArchon from the Boyden plasmid pAAV-Syn-SomArchon from ( c ), with scanning subsequence window as in ( d ) and K = 1024. Predicted probabilities for Omar Akbari (red) and Boyden (blue) are shown, along with the correspondingly colored plasmid schematic. All unlabeled regions are from the Akbari vector. The right and left homology arms shown in gray were introduced by our design and come from neither lab’s material, and the U6a and U6c were from Akbari lab material (Addgene # 117221 and # 117223 , respectively) but introduced into the backbone by our design (gray outlined in red).
Edward Boyden Lab, supplied by Addgene inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/edward boyden lab/product/Addgene inc
Average 96 stars, based on 1 article reviews
edward boyden lab - by Bioz Stars, 2026-05
96/100 stars
  Buy from Supplier
virus strains paav camkii archt gfp backbone edward boyden lab mit addgene plasmid  (Addgene inc)
92
Addgene inc virus strains paav camkii archt gfp backbone edward boyden lab mit addgene plasmid
a Two-dimensional tSNE of the pre-logit hidden layer of deteRNNt for the validation set. Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward <t>Boyden</t> Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ). The second-most likely lab predicted by deteRNNt on this plasmid is shown in red, with plasmid schematic above. d Predicting lab-of-origin from subsequences of varying lengths K scanned across the linear sequence. At each x , the probabilities are given by softmax of the mean of logits from subsequences which include that position in the window. Color indicates subsequence K -mer length. Linear sequence position is given by the x axis and shared with ( b ) with the plasmid schematic above. e Custom-designed gene-drive plasmid derived from an Omar Akbari Aedes aegypti germline-Cas9 gene-drive backbone (AAEL010097-Cas9, Addgene # 100707 ) carrying a payload of Cas9-dsRed, a guide cassette, and SomArchon from the Boyden plasmid pAAV-Syn-SomArchon from ( c ), with scanning subsequence window as in ( d ) and K = 1024. Predicted probabilities for Omar Akbari (red) and Boyden (blue) are shown, along with the correspondingly colored plasmid schematic. All unlabeled regions are from the Akbari vector. The right and left homology arms shown in gray were introduced by our design and come from neither lab’s material, and the U6a and U6c were from Akbari lab material (Addgene # 117221 and # 117223 , respectively) but introduced into the backbone by our design (gray outlined in red).
Virus Strains Paav Camkii Archt Gfp Backbone Edward Boyden Lab Mit Addgene Plasmid, supplied by Addgene inc, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/virus strains paav camkii archt gfp backbone edward boyden lab mit addgene plasmid/product/Addgene inc
Average 92 stars, based on 1 article reviews
virus strains paav camkii archt gfp backbone edward boyden lab mit addgene plasmid - by Bioz Stars, 2026-05
92/100 stars
  Buy from Supplier
paav syn flexrc  (Addgene inc)
93
Addgene inc paav syn flexrc
a Two-dimensional tSNE of the pre-logit hidden layer of deteRNNt for the validation set. Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward <t>Boyden</t> Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ). The second-most likely lab predicted by deteRNNt on this plasmid is shown in red, with plasmid schematic above. d Predicting lab-of-origin from subsequences of varying lengths K scanned across the linear sequence. At each x , the probabilities are given by softmax of the mean of logits from subsequences which include that position in the window. Color indicates subsequence K -mer length. Linear sequence position is given by the x axis and shared with ( b ) with the plasmid schematic above. e Custom-designed gene-drive plasmid derived from an Omar Akbari Aedes aegypti germline-Cas9 gene-drive backbone (AAEL010097-Cas9, Addgene # 100707 ) carrying a payload of Cas9-dsRed, a guide cassette, and SomArchon from the Boyden plasmid pAAV-Syn-SomArchon from ( c ), with scanning subsequence window as in ( d ) and K = 1024. Predicted probabilities for Omar Akbari (red) and Boyden (blue) are shown, along with the correspondingly colored plasmid schematic. All unlabeled regions are from the Akbari vector. The right and left homology arms shown in gray were introduced by our design and come from neither lab’s material, and the U6a and U6c were from Akbari lab material (Addgene # 117221 and # 117223 , respectively) but introduced into the backbone by our design (gray outlined in red).
Paav Syn Flexrc, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/paav syn flexrc/product/Addgene inc
Average 93 stars, based on 1 article reviews
paav syn flexrc - by Bioz Stars, 2026-05
93/100 stars
  Buy from Supplier
hr2 2a halo cassette  (Addgene inc)
91
Addgene inc hr2 2a halo cassette
a Two-dimensional tSNE of the pre-logit hidden layer of deteRNNt for the validation set. Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward <t>Boyden</t> Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ). The second-most likely lab predicted by deteRNNt on this plasmid is shown in red, with plasmid schematic above. d Predicting lab-of-origin from subsequences of varying lengths K scanned across the linear sequence. At each x , the probabilities are given by softmax of the mean of logits from subsequences which include that position in the window. Color indicates subsequence K -mer length. Linear sequence position is given by the x axis and shared with ( b ) with the plasmid schematic above. e Custom-designed gene-drive plasmid derived from an Omar Akbari Aedes aegypti germline-Cas9 gene-drive backbone (AAEL010097-Cas9, Addgene # 100707 ) carrying a payload of Cas9-dsRed, a guide cassette, and SomArchon from the Boyden plasmid pAAV-Syn-SomArchon from ( c ), with scanning subsequence window as in ( d ) and K = 1024. Predicted probabilities for Omar Akbari (red) and Boyden (blue) are shown, along with the correspondingly colored plasmid schematic. All unlabeled regions are from the Akbari vector. The right and left homology arms shown in gray were introduced by our design and come from neither lab’s material, and the U6a and U6c were from Akbari lab material (Addgene # 117221 and # 117223 , respectively) but introduced into the backbone by our design (gray outlined in red).
Hr2 2a Halo Cassette, supplied by Addgene inc, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/hr2 2a halo cassette/product/Addgene inc
Average 91 stars, based on 1 article reviews
hr2 2a halo cassette - by Bioz Stars, 2026-05
91/100 stars
  Buy from Supplier

Image Search Results


a Two-dimensional tSNE of the pre-logit hidden layer of deteRNNt for the validation set. Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward Boyden Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ). The second-most likely lab predicted by deteRNNt on this plasmid is shown in red, with plasmid schematic above. d Predicting lab-of-origin from subsequences of varying lengths K scanned across the linear sequence. At each x , the probabilities are given by softmax of the mean of logits from subsequences which include that position in the window. Color indicates subsequence K -mer length. Linear sequence position is given by the x axis and shared with ( b ) with the plasmid schematic above. e Custom-designed gene-drive plasmid derived from an Omar Akbari Aedes aegypti germline-Cas9 gene-drive backbone (AAEL010097-Cas9, Addgene # 100707 ) carrying a payload of Cas9-dsRed, a guide cassette, and SomArchon from the Boyden plasmid pAAV-Syn-SomArchon from ( c ), with scanning subsequence window as in ( d ) and K = 1024. Predicted probabilities for Omar Akbari (red) and Boyden (blue) are shown, along with the correspondingly colored plasmid schematic. All unlabeled regions are from the Akbari vector. The right and left homology arms shown in gray were introduced by our design and come from neither lab’s material, and the U6a and U6c were from Akbari lab material (Addgene # 117221 and # 117223 , respectively) but introduced into the backbone by our design (gray outlined in red).

Journal: Nature Communications

Article Title: A machine learning toolkit for genetic engineering attribution to facilitate biosecurity

doi: 10.1038/s41467-020-19612-0

Figure Lengend Snippet: a Two-dimensional tSNE of the pre-logit hidden layer of deteRNNt for the validation set. Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward Boyden Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ). The second-most likely lab predicted by deteRNNt on this plasmid is shown in red, with plasmid schematic above. d Predicting lab-of-origin from subsequences of varying lengths K scanned across the linear sequence. At each x , the probabilities are given by softmax of the mean of logits from subsequences which include that position in the window. Color indicates subsequence K -mer length. Linear sequence position is given by the x axis and shared with ( b ) with the plasmid schematic above. e Custom-designed gene-drive plasmid derived from an Omar Akbari Aedes aegypti germline-Cas9 gene-drive backbone (AAEL010097-Cas9, Addgene # 100707 ) carrying a payload of Cas9-dsRed, a guide cassette, and SomArchon from the Boyden plasmid pAAV-Syn-SomArchon from ( c ), with scanning subsequence window as in ( d ) and K = 1024. Predicted probabilities for Omar Akbari (red) and Boyden (blue) are shown, along with the correspondingly colored plasmid schematic. All unlabeled regions are from the Akbari vector. The right and left homology arms shown in gray were introduced by our design and come from neither lab’s material, and the U6a and U6c were from Akbari lab material (Addgene # 117221 and # 117223 , respectively) but introduced into the backbone by our design (gray outlined in red).

Article Snippet: Colored by probability assigned to the true lab. An interactive 3d visualization is available at http://papers.altlabs.tech/visualize-hiddens.html . b Scanning mask of 10 N’s across linear sequence ( x axis) of Chris Voigt lab plasmid pCI-YFP, (Genbank JQ394803.1 ) on the brink of predicting Baojun Wang Lab vs. Voigt Lab. At each x position is shown the probabilities given by softmax on the mean of the logits from all the sequences which include that position masked with N. Plasmid schematic is shown below. c The scanning 10-N mask analysis from ( b ) applied to Edward Boyden Lab Plasmid pAAV-Syn-SomArchon (Addgene # 126941 ).

Techniques: Biomarker Discovery, Sequencing, Plasmid Preparation, Derivative Assay